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--- codes:arcos [2014/07/07 12:38] – margreet
+++ codes:arcos [2025/04/17 13:57] (current) – external edit 127.0.0.1
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   * Parallel computations in multi-core machines.
   * Automatic code generator for plasmo-chemical models.
+==== Download and browse ====
+You can download the ARCoS library here:
+* [[https://gitlab.com/MD-CWI-NL/arcos|Download ARCoS]]
+* [[http://cwimd.nl/other_files/arcos_html/|Documentation ARCoS]]
+If you want to use the FISHPACK library, please fill the FISHPACK order form. If you just want to take a look at parts of the source code, you can Browse the source code.
+We distribute ARCoS under a fair use policy: if you use it for your research, we expect that you cite our work.
 ==== People ====
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 [[http://homepages.cwi.nl/~willem/|Willem Hundsdorfer]] : As a Numerical Analysis expert, he has overviewed and contributed to the development of ARCoS since the beginning.
-[[http://www.cwi.nl/people/211|Margreet Nool]] : Senior scientific programmer improved ...
+[[http://www.cwi.nl/people/211|Margreet Nool]] : Senior scientific programmer improved the performance and increased the modularity of the code and simplified the input. Moreover, she added the Doxygen documentation.
 [[http://www.iaa.es/~aluque/|Alejandro Luque]] : During a 3-year post-doc at CWI, he reimplemented the original codebase of ARCoS porting it from FORTRAN to C. He also implemented photo-ionization and parallelized and extended the code to 3D by means of Fast Fourier Transforms.
@@ Line 34: / Line 47: @@
 These papers describe the algorithms used in ARCoS or include results obtained with it.
-- The refinement algorithm for the Poisson equation:
+* The refinement algorithm for the Poisson equation:
+  * //A nested-grid finite-difference Poisson solver for concentrated source terms//, J. Wackers J. Comp. Appl. Math. **180**, 1 (2005)[[http://dl.acm.org/citation.cfm?id=1085651|paper]]
-* A nested-grid finite-difference Poisson solver for concentrated source terms, J. Wackers J. Comp. Appl. Math. '''180''', 1 (2005}
+* A comprehensive description of the discretization and refinement algorithms that are implemented in ARCoS:
+  * //An adaptive grid refinement strategy for the simulation of negative streamers//, C. Montijn, W. Hundsdorfer, U. Ebert, J. Comp. Phys. **219**, 801-835 (2006), [[http://homepages.cwi.nl/~ebert/CaroJCP06.pdf|paper]].
-- A comprehensive description of the discretization and refinement algorithms that are implemented in ARCoS:
+  * //Evolution of negative streamers in nitrogen : a numerical investigation on adaptive grids//, Doctoral degree 20-12-2005; TU Eindhoven, Department of Applied Physics; Supervisor: U.M. Ebert, [[http://alexandria.tue.nl/repository/books/598717.pdf|PhD Thesis C. Montijn]].
- * An adaptive grid refinement strategy for the simulation of negative streamers, C. Montijn, W. Hundsdorfer, U. Ebert, J. Comp. Phys. '''219''', 801-835 (2006), [[http://homepages.cwi.nl/~ebert/CaroJCP06.pdf|paper]].
- * Evolution of negative streamers in nitrogen : a numerical investigation on adaptive grids, Doctoral degree 20-12-2005; TU Eindhoven, Department of Applied Physics; Supervisor: U.M. Ebert, [[http://alexandria.tue.nl/repository/books/598717.pdf|PhD Thesis C. Montijn]].
+* We introduce a numerical method to speed up the calculation of the photoionisation term in streamer simulations and\\ apply it to the simulation of negative streamers:
+  * //Photoionisation in negative streamers: fast computations and two propagation modes//, A. Luque, U. Ebert, C. Montijn, W. Hundsdorfer, Appl. Phys. Lett. **90**, 081501 (2007), [[http://homepages.cwi.nl/~ebert/LuqueAPL07.pdf|paper]].
+*  Part of this paper consisted in the use of ARCoS to test a boundary condition for streamers in 2D:
+  *  //Construction and test of a moving boundary model for negative streamer discharges//, F. Brau, A. Luque, B. Meulenbroek, U. Ebert, L. Schaefer, Phys. Rev. E **77**, 026219 (2008) [10 pages, 7 figures],[[http://homepages.cwi.nl/~ebert/MBAPRE08.pdf|paper]].
-- We introduce a numerical method to speed up the calculation of the photoionisation term in streamer simulations and apply it to the simulation of negative streamers:
-* ''Photoionisation in negative streamers: fast computations and two propagation modes'', A. Luque, U. Ebert, C. Montijn, W. Hundsdorfer, Appl. Phys. Lett. '''90''', 081501 (2007), [http://homepages.cwi.nl/~ebert/LuqueAPL07.pdf paper].
-- Part of this paper consisted in the use of ARCoS to test a boundary condition for streamers in 2D:
+* ARCoS was used to show the relationship between streamer discharges and Saffman-Taylor fingers:
-* ''Construction and test of a moving boundary model for negative streamer discharges'', F. Brau, A. Luque, B. Meulenbroek, U. Ebert, L. Schaefer, Phys. Rev. E '''77''', 026219 (2008) [10 pages, 7 figures],[http://homepages.cwi.nl/~ebert/MBAPRE08.pdf paper].
+  *  //Saffman-Taylor streamer discharges: a study on interacting streamers//, A. Luque, F. Brau, U. Ebert, Phys. Rev. E **78**, 016206 (2008) [6 pages, 6 figures], [[http://arxiv.org/abs/0708.1722|print]].
+* We describe the numerical method to simulate streamers in 3D in multi-core machines. This method is then applied to the study of interacting streamers:
+  *  //Interaction of streamers in air and other oxygen-nitrogen mixtures//, A. Luque, U. Ebert, and W. Hundsdorfer, Phys. Rev. Lett. **101**, 075005 (2008), [4 pages, 4 figures], [[http://arxiv.org/abs/0712.2774| print]].\\ covered in //A bolt from the blue//, Research Highlight in [[http://www.nature.com/nature/journal/v455/n7209/full/455004c.html|Nature]], [[http://homepages.cwi.nl/~ebert/Nature08.pdf|pdf]], 4 sept. 2008.
-- ARCoS was used to show the relationship between streamer discharges and Saffman-Taylor fingers:
-* ''Saffman-Taylor streamer discharges: a study on interacting streamers'', A. Luque, F. Brau, U. Ebert, revised for Phys. Rev. E [6 pages, 6 figures], [http://arxiv.org/abs/0708.1722 print].
-- We describe the numerical method to simulate streamers in 3D in multi-core machines. This method is then applied to the study of interacting streamers:
-* ''Interaction of streamers in air and other oxygen-nitrogen mixtures'', A. Luque, U. Ebert, and W. Hundsdorfer, revised for Phys. Rev. Lett. [4 pages, 4 figures], [http://arxiv.org/abs/0712.2774 print].